Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator nhar | D4M06_RS02105 | Not Available | Negative | 475731 - 476630 | 34096.1 |
| na+/h+ antiporter nhaa | D4M06_RS02110 | Not Available | Negative | 476696 - 477862 | 41376.3 |
| type i toxin-antitoxin system toxin mokc | D4M06_RS02115 | Not Available | Positive | 478391 - 478600 | 7770.8 |
| molecular chaperone dnaj | D4M06_RS02120 | Not Available | Negative | 478704 - 479834 | 41046.7 |
| molecular chaperone dnak | D4M06_RS02125 | Not Available | Negative | 479923 - 481839 | 69118.9 |
| duf2541 family protein | D4M06_RS02130 | Not Available | Positive | 482216 - 482620 | 14466.4 |
| acidic protein msyb | D4M06_RS02135 | Not Available | Positive | 482646 - 483359 | 26682.5 |
| acetate uptake transporter | D4M06_RS02140 | Not Available | Positive | 483508 - 484074 | 20072.2 |
| molybdopterin adenylyltransferase | D4M06_RS02145 | Not Available | Negative | 484109 - 484696 | 21223.6 |
| transaldolase | D4M06_RS02150 | Not Available | Negative | 484811 - 485764 | 35221.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




