Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | D4M06_RS01845 | Not Available | Positive | 414683 - 416293 | 59398.5 |
| thiamine abc transporter atp-binding protein thiq | D4M06_RS01850 | Not Available | Positive | 416277 - 416975 | 25026.7 |
| deda family protein | D4M06_RS01855 | Not Available | Negative | 417062 - 417826 | 28199.7 |
| arabinose operon transcriptional regulator arac | D4M06_RS01860 | Not Available | Negative | 417912 - 418790 | 33413.8 |
| ribulokinase | D4M06_RS01865 | Not Available | Positive | 419129 - 420829 | 61230.8 |
| l-arabinose isomerase | D4M06_RS01870 | Not Available | Positive | 420840 - 422342 | 56092.2 |
| l-ribulose-5-phosphate 4-epimerase | D4M06_RS01875 | Not Available | Positive | 422542 - 423237 | 25504.3 |
| dna polymerase ii | D4M06_RS01880 | Not Available | Positive | 423312 - 425663 | 90145.8 |
| rna polymerase-associated protein rapa | D4M06_RS01885 | Not Available | Positive | 425827 - 428733 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | D4M06_RS01890 | Not Available | Positive | 428745 - 429404 | 24861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




