Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator leuo | D4M06_RS01795 | Not Available | Negative | 404106 - 405050 | 35715.8 |
| leu operon leader peptide | D4M06_RS01800 | Not Available | Positive | 405708 - 405794 | 3146.0 |
| 2-isopropylmalate synthase | D4M06_RS01805 | Not Available | Positive | 405887 - 407458 | 57317.2 |
| 3-isopropylmalate dehydrogenase | D4M06_RS01810 | Not Available | Positive | 407458 - 408549 | 39517.2 |
| 3-isopropylmalate dehydratase large subunit | D4M06_RS01815 | Not Available | Positive | 408552 - 409952 | 49900.8 |
| 3-isopropylmalate dehydratase small subunit | D4M06_RS01820 | Not Available | Positive | 409963 - 410568 | 22520.7 |
| glucose uptake inhibitor sgrt | D4M06_RS01825 | Not Available | Negative | 410676 - 410807 | 5382.47 |
| hth-type transcriptional regulator sgrr | D4M06_RS01830 | Not Available | Positive | 410896 - 412554 | 64123.8 |
| t3ss effector espy2 | D4M06_RS01835 | Not Available | Negative | 412783 - 413352 | 21439.3 |
| thiamine abc transporter substrate binding subunit | D4M06_RS01840 | Not Available | Positive | 413724 - 414707 | 36177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




