Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent pilin | D4M06_RS01645 | Not Available | Positive | 371985 - 372425 | 15534.6 |
| type ii secretion system protein gspe | D4M06_RS01650 | Not Available | Positive | 372435 - 373820 | 50565.5 |
| protein transport protein hofc | D4M06_RS01655 | Not Available | Positive | 373810 - 375012 | 44402.2 |
| gmp reductase | D4M06_RS01660 | Not Available | Negative | 375047 - 376090 | 37399.9 |
| dephospho-coa kinase | D4M06_RS01665 | Not Available | Positive | 376315 - 376935 | 22623.0 |
| cell division protein zapd | D4M06_RS01670 | Not Available | Positive | 376935 - 377678 | 28309.4 |
| dna gyrase inhibitor yacg | D4M06_RS01675 | Not Available | Positive | 377688 - 377885 | 7306.49 |
| 8-oxo-dgtp diphosphatase mutt | D4M06_RS01680 | Not Available | Negative | 377976 - 378374 | 15163.2 |
| preprotein translocase subunit seca | D4M06_RS01685 | Not Available | Negative | 378434 - 381139 | 101971.0 |
| seca regulator secm | D4M06_RS01690 | Not Available | Negative | 381201 - 381713 | 18866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




