Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | D4M06_RS01595 | Not Available | Negative | 355439 - 358036 | 93489.4 |
| duf3300 domain-containing protein | D4M06_RS01600 | Not Available | Positive | 358391 - 360244 | 69248.5 |
| dihydrolipoyl dehydrogenase | D4M06_RS01605 | Not Available | Negative | 360315 - 361739 | 50691.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | D4M06_RS01610 | Not Available | Negative | 361947 - 363839 | 66187.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D4M06_RS01615 | Not Available | Negative | 363854 - 366517 | 99674.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | D4M06_RS01620 | Not Available | Negative | 366678 - 367442 | 29427.2 |
| aromatic amino acid transporter arop | D4M06_RS01625 | Not Available | Positive | 367983 - 369356 | 49666.0 |
| beta-lactamase regulator ampe | D4M06_RS01630 | Not Available | Negative | 369399 - 370253 | 32142.9 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | D4M06_RS01635 | Not Available | Negative | 370250 - 370801 | 20495.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | D4M06_RS01640 | Not Available | Positive | 370889 - 371782 | 32774.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




