Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D4M06_RS01545 | Not Available | Negative | 345179 - 345949 | 28517.9 |
| abc transporter atp-binding protein | D4M06_RS01550 | Not Available | Negative | 345946 - 346872 | 34662.2 |
| carbonate dehydratase | D4M06_RS01555 | Not Available | Positive | 346981 - 347643 | 25156.3 |
| hypoxanthine phosphoribosyltransferase | D4M06_RS01560 | Not Available | Negative | 347684 - 348220 | 20116.4 |
| pyrroloquinoline quinone-dependent dehydrogenase | D4M06_RS01565 | Not Available | Positive | 348426 - 350816 | 86782.1 |
| multicopper oxidase cueo | D4M06_RS01570 | Not Available | Negative | 351018 - 352568 | 56677.7 |
| yacc family pilotin-like protein | D4M06_RS01575 | Not Available | Positive | 352734 - 353081 | 12854.4 |
| polyamine aminopropyltransferase | D4M06_RS01580 | Not Available | Positive | 353187 - 354053 | 32309.1 |
| adenosylmethionine decarboxylase | D4M06_RS01585 | Not Available | Positive | 354069 - 354863 | 30386.3 |
| yacl family protein | D4M06_RS01590 | Not Available | Negative | 354901 - 355263 | 13942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




