Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | D4M06_RS01445 | Not Available | Negative | 325167 - 327596 | 89161.1 |
| rna 2',3'-cyclic phosphodiesterase | D4M06_RS01450 | Not Available | Positive | 327670 - 328200 | 19965.1 |
| dna/rna nuclease sfsa | D4M06_RS01455 | Not Available | Positive | 328215 - 328919 | 26230.2 |
| rna polymerase-binding transcription factor dksa | D4M06_RS01460 | Not Available | Positive | 329097 - 329552 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | D4M06_RS01465 | Not Available | Positive | 329589 - 330515 | 34886.6 |
| polynucleotide adenylyltransferase pcnb | D4M06_RS01470 | Not Available | Positive | 330554 - 331972 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D4M06_RS01475 | Not Available | Positive | 331969 - 332451 | 17984.6 |
| fimbrial protein | D4M06_RS01480 | Not Available | Positive | 332732 - 333328 | 20366.2 |
| fimbrial chaperone | D4M06_RS01485 | Not Available | Positive | 333415 - 334140 | 26318.4 |
| outer membrane usher protein | D4M06_RS01490 | Not Available | Positive | 334182 - 336782 | 94595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




