Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tric cation channel family protein | D4M06_RS01395 | Not Available | Positive | 312200 - 312823 | 22110.1 |
| iron-sulfur cluster insertion protein erpa | D4M06_RS01400 | Not Available | Negative | 312870 - 313214 | 12101.2 |
| hypothetical protein | D4M06_RS01405 | Not Available | Negative | 313207 - 313272 | 2329.94 |
| h(+)/cl(-) exchange transporter clca | D4M06_RS01410 | Not Available | Negative | 313296 - 314717 | 50337.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | D4M06_RS01415 | Not Available | Positive | 314942 - 316222 | 45358.7 |
| fe(3+)-hydroxamate abc transporter permease fhub | D4M06_RS01420 | Not Available | Negative | 316257 - 318239 | 70352.5 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | D4M06_RS01425 | Not Available | Negative | 318236 - 319126 | 33000.2 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | D4M06_RS01430 | Not Available | Negative | 319126 - 319923 | 28872.2 |
| ferrichrome porin fhua | D4M06_RS01435 | Not Available | Negative | 319974 - 322217 | 82171.5 |
| bifunctional glycosyl transferase/transpeptidase | D4M06_RS01440 | Not Available | Negative | 322437 - 324971 | 94270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




