Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | D4M06_RS01345 | Not Available | Negative | 299938 - 300663 | 26745.2 |
| type i methionyl aminopeptidase | D4M06_RS01350 | Not Available | Positive | 301031 - 301825 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | D4M06_RS01355 | Not Available | Positive | 301887 - 304559 | 102428.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D4M06_RS01360 | Not Available | Positive | 304590 - 305414 | 29879.8 |
| duf3461 family protein | D4M06_RS01365 | Not Available | Positive | 305729 - 306115 | 15097.0 |
| cdar family transcriptional regulator | D4M06_RS01370 | Not Available | Negative | 306204 - 307361 | 43688.1 |
| serine endoprotease degp | D4M06_RS01375 | Not Available | Negative | 307516 - 308940 | 49387.3 |
| dgtpase | D4M06_RS01380 | Not Available | Negative | 309070 - 310587 | 59326.1 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D4M06_RS01385 | Not Available | Positive | 310671 - 311369 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | D4M06_RS01390 | Not Available | Positive | 311362 - 312162 | 29395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




