Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rho-binding antiterminator | D4M06_RS01245 | Not Available | Positive | 276741 - 277001 | 9698.45 |
| trna lysidine(34) synthetase tils | D4M06_RS01250 | Not Available | Negative | 277054 - 278349 | 47881.4 |
| voc family protein | D4M06_RS01255 | Not Available | Negative | 278414 - 278803 | 14707.4 |
| lysine decarboxylase ldcc | D4M06_RS01260 | Not Available | Negative | 278860 - 281001 | 80511.8 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | D4M06_RS01265 | Not Available | Negative | 281100 - 282059 | 35243.6 |
| dna polymerase iii subunit alpha | D4M06_RS01270 | Not Available | Negative | 282072 - 285554 | 129907.0 |
| ribonuclease hii | D4M06_RS01275 | Not Available | Negative | 285591 - 286187 | 21467.2 |
| lipid-a-disaccharide synthase | D4M06_RS01280 | Not Available | Negative | 286184 - 287332 | 42400.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | D4M06_RS01285 | Not Available | Negative | 287332 - 288120 | 28051.7 |
| 3-hydroxyacyl-acp dehydratase fabz | D4M06_RS01290 | Not Available | Negative | 288124 - 288579 | 17034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




