Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease meti | D4M06_RS01195 | Not Available | Positive | 269072 - 269725 | 23243.6 |
| methionine abc transporter substrate-binding lipoprotein metq | D4M06_RS01200 | Not Available | Positive | 269765 - 270580 | 29418.2 |
| rcs stress response system protein rcsf | D4M06_RS01205 | Not Available | Positive | 270698 - 271102 | 14178.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | D4M06_RS01210 | Not Available | Positive | 271099 - 271806 | 26437.9 |
| proline--trna ligase | D4M06_RS01215 | Not Available | Positive | 271917 - 273635 | 63655.3 |
| yaef family permuted papain-like enzyme | D4M06_RS01220 | Not Available | Positive | 273688 - 274512 | 30072.2 |
| envelope stress response activation lipoprotein nlpe | D4M06_RS01225 | Not Available | Negative | 274712 - 275422 | 25855.7 |
| aminoacyl-trna hydrolase | D4M06_RS01230 | Not Available | Negative | 275436 - 275846 | 15137.3 |
| yaeq family protein | D4M06_RS01235 | Not Available | Negative | 275843 - 276388 | 20849.7 |
| yaep family protein | D4M06_RS01240 | Not Available | Positive | 276554 - 276754 | 7214.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




