Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease smrb | D4M06_RS01045 | Not Available | Positive | 232234 - 232785 | 20954.5 |
| duf2544 domain-containing protein | D4M06_RS01050 | Not Available | Negative | 232956 - 233798 | 30880.4 |
| fimbrial protein | D4M06_RS01055 | Not Available | Negative | 233800 - 234321 | 18167.5 |
| fimbrial protein | D4M06_RS01060 | Not Available | Negative | 234318 - 234788 | 17278.4 |
| fimbrial protein | D4M06_RS01065 | Not Available | Negative | 234785 - 235285 | 17489.2 |
| fimbria/pilus periplasmic chaperone | D4M06_RS01070 | Not Available | Negative | 235296 - 236054 | 27893.6 |
| fimbrial biogenesis outer membrane usher protein | D4M06_RS01075 | Not Available | Negative | 236077 - 238716 | 96855.0 |
| type 1 fimbrial protein | D4M06_RS01080 | Not Available | Negative | 238798 - 239361 | 19661.8 |
| phosphohistidine phosphatase sixa | D4M06_RS01085 | Not Available | Negative | 240008 - 240493 | 17250.8 |
| fatty acid oxidation complex subunit alpha fadj | D4M06_RS01090 | Not Available | Negative | 240696 - 242840 | 76972.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




