Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella biosynthesis regulator flk | D4M06_RS00995 | Not Available | Positive | 221568 - 222563 | 36612.4 |
| mfs transporter | D4M06_RS01000 | Not Available | Negative | 222560 - 223738 | 40453.7 |
| beta-ketoacyl-acp synthase i | D4M06_RS01005 | Not Available | Negative | 224013 - 225233 | 42615.8 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D4M06_RS01010 | Not Available | Positive | 225392 - 227398 | 74472.4 |
| yfcl family protein | D4M06_RS01015 | Not Available | Negative | 227519 - 227797 | 10000.6 |
| elongation factor p hydroxylase | D4M06_RS01020 | Not Available | Negative | 227831 - 228379 | 21161.6 |
| tsup family transporter | D4M06_RS01025 | Not Available | Negative | 228379 - 229188 | 28645.2 |
| penicillin-insensitive murein endopeptidase | D4M06_RS01030 | Not Available | Negative | 229188 - 230012 | 30146.5 |
| chorismate synthase | D4M06_RS01035 | Not Available | Negative | 230016 - 231101 | 39153.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D4M06_RS01040 | Not Available | Negative | 231136 - 232068 | 34959.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




