Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | D4M06_RS00945 | Not Available | Negative | 211402 - 211971 | 20696.3 |
| amidophosphoribosyltransferase | D4M06_RS00950 | Not Available | Negative | 212066 - 213583 | 56505.3 |
| colicin v production protein | D4M06_RS00955 | Not Available | Negative | 213620 - 214108 | 17976.1 |
| cell division protein dedd | D4M06_RS00960 | Not Available | Negative | 214640 - 215302 | 22967.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | D4M06_RS00965 | Not Available | Negative | 215292 - 216560 | 45400.1 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | D4M06_RS00970 | Not Available | Negative | 216630 - 217544 | 33323.9 |
| deda family protein | D4M06_RS00975 | Not Available | Negative | 217700 - 218359 | 24511.7 |
| trna pseudouridine(38-40) synthase trua | D4M06_RS00980 | Not Available | Negative | 218442 - 219254 | 30386.2 |
| aspartate-semialdehyde dehydrogenase | D4M06_RS00985 | Not Available | Negative | 219254 - 220267 | 36396.2 |
| 4-phosphoerythronate dehydrogenase pdxb | D4M06_RS00990 | Not Available | Negative | 220333 - 221469 | 41300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




