Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-deoxynucleotidase | D4M06_RS00845 | Not Available | Positive | 192207 - 192806 | 22695.3 |
| slc13 family permease | D4M06_RS00850 | Not Available | Negative | 192865 - 194697 | 65876.0 |
| hexitol phosphatase hpxa | D4M06_RS00855 | Not Available | Negative | 194784 - 195434 | 23026.8 |
| yfbu family protein | D4M06_RS00860 | Not Available | Negative | 195445 - 195939 | 19537.4 |
| duf412 domain-containing protein | D4M06_RS00865 | Not Available | Negative | 196022 - 196477 | 17214.1 |
| acetate kinase | D4M06_RS00870 | Not Available | Positive | 196815 - 198017 | 43293.0 |
| phosphate acetyltransferase | D4M06_RS00875 | Not Available | Positive | 198092 - 200236 | 77162.5 |
| putative basic amino acid antiporter yfcc | D4M06_RS00880 | Not Available | Positive | 200426 - 201946 | 54800.0 |
| nudix hydrolase yfcd | D4M06_RS00885 | Not Available | Negative | 201979 - 202521 | 20376.9 |
| phosphodiesterase | D4M06_RS00890 | Not Available | Negative | 202579 - 203130 | 19992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




