Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response protein elab | D4M06_RS00740 | Not Available | Negative | 168410 - 168715 | 11306.3 |
| gnat family n-acetyltransferase | D4M06_RS00745 | Not Available | Negative | 168770 - 169231 | 17420.7 |
| ribonuclease bn | D4M06_RS00750 | Not Available | Positive | 169296 - 170213 | 33009.7 |
| deubiquitinase | D4M06_RS00755 | Not Available | Positive | 170404 - 171624 | 46519.0 |
| yfbm family protein | D4M06_RS00765 | Not Available | Positive | 172756 - 173259 | 18992.8 |
| nadh-quinone oxidoreductase subunit nuon | D4M06_RS00770 | Not Available | Negative | 173326 - 174783 | 52047.3 |
| nadh-quinone oxidoreductase subunit m | D4M06_RS00775 | Not Available | Negative | 174790 - 176319 | 56527.9 |
| nadh-quinone oxidoreductase subunit l | D4M06_RS00780 | Not Available | Negative | 176550 - 178391 | 66412.1 |
| nadh-quinone oxidoreductase subunit nuok | D4M06_RS00785 | Not Available | Negative | 178388 - 178690 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | D4M06_RS00790 | Not Available | Negative | 178687 - 179241 | 19875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




