Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D4M06_RS27335 | Not Available | Positive | 5441894 - 5442469 | 21932.3 |
| hypothetical protein | D4M06_RS27340 | Not Available | Positive | 5443763 - 5444434 | 26332.3 |
| hok/gef family protein | D4M06_RS27345 | Not Available | Negative | 5445307 - 5445447 | 5271.78 |
| type b 50s ribosomal protein l31 | D4M06_RS27350 | Not Available | Negative | 5445749 - 5446012 | 9916.74 |
| urease accessory protein ureg | D4M06_RS27365 | Not Available | Negative | 5447224 - 5447841 | 22125.6 |
| urease accessory protein uref | D4M06_RS27370 | Not Available | Negative | 5447853 - 5448527 | 25156.9 |
| urease accessory protein uree | D4M06_RS27375 | Not Available | Negative | 5448528 - 5448992 | 17307.7 |
| urease subunit alpha | D4M06_RS27380 | Not Available | Negative | 5449002 - 5450705 | 60498.2 |
| urease subunit beta | D4M06_RS27385 | Not Available | Negative | 5450698 - 5451018 | 11762.1 |
| urease subunit gamma | D4M06_RS27390 | Not Available | Negative | 5451027 - 5451329 | 11085.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




