Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS27285 | Not Available | Positive | 5430978 - 5431847 | 33009.0 |
| duf4156 domain-containing protein | D4M06_RS27290 | Not Available | Negative | 5432040 - 5432393 | 11959.2 |
| chaperonin groel | D4M06_RS27295 | Not Available | Negative | 5432531 - 5434177 | 57332.4 |
| co-chaperone groes | D4M06_RS27300 | Not Available | Negative | 5434221 - 5434514 | 10387.6 |
| l-methionine/branched-chain amino acid transporter | D4M06_RS27305 | Not Available | Positive | 5434790 - 5436046 | 44801.2 |
| membrane protein fxsa | D4M06_RS27310 | Not Available | Negative | 5436062 - 5436538 | 17679.1 |
| aspartate ammonia-lyase | D4M06_RS27315 | Not Available | Positive | 5436875 - 5438311 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | D4M06_RS27320 | Not Available | Positive | 5438429 - 5439730 | 45753.5 |
| divalent cation tolerance protein cuta | D4M06_RS27325 | Not Available | Positive | 5439846 - 5440184 | 12331.7 |
| protein-disulfide reductase dsbd | D4M06_RS27330 | Not Available | Positive | 5440160 - 5441857 | 61842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




