Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | D4M06_RS27235 | Not Available | Positive | 5424856 - 5425590 | 27124.5 |
| fumarate reductase subunit frdc | D4M06_RS27240 | Not Available | Positive | 5425601 - 5425996 | 15015.8 |
| fumarate reductase subunit frdd | D4M06_RS27245 | Not Available | Positive | 5426007 - 5426366 | 13107.8 |
| blaec family class c beta-lactamase | D4M06_RS27250 | Not Available | Positive | 5426429 - 5427562 | 41533.8 |
| lipocalin family protein | D4M06_RS27255 | Not Available | Positive | 5427650 - 5428183 | 19852.7 |
| quaternary ammonium compound-resistance protein suge | D4M06_RS27260 | Not Available | Negative | 5428180 - 5428497 | 10901.0 |
| lipoprotein toxin entericidin b | D4M06_RS27265 | Not Available | Negative | 5428673 - 5428819 | 4809.81 |
| lipoprotein antitoxin entericidin a | D4M06_RS27270 | Not Available | Negative | 5428930 - 5429055 | 4359.48 |
| elongation factor p | D4M06_RS27275 | Not Available | Negative | 5429107 - 5429673 | 20592.4 |
| ef-p beta-lysylation protein epmb | D4M06_RS27280 | Not Available | Positive | 5429715 - 5430743 | 38714.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




