Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS27185 | Not Available | Positive | 5420513 - 5420766 | 9804.47 |
| shufflon protein c' | D4M06_RS27190 | Not Available | Negative | 5421007 - 5421204 | 7142.49 |
| hypothetical protein | D4M06_RS27195 | Not Available | Positive | 5421218 - 5421497 | 9990.45 |
| replication protein | D4M06_RS27200 | Not Available | Positive | 5421529 - 5421664 | 5158.04 |
| hypothetical protein | D4M06_RS27205 | Not Available | Negative | 5421665 - 5422056 | 14741.5 |
| perc family transcriptional regulator | D4M06_RS27210 | Not Available | Positive | 5422541 - 5422818 | 10504.7 |
| protease ftsh-inhibitory lysogeny factor ciii | D4M06_RS27215 | Not Available | Positive | 5422973 - 5423077 | 3942.72 |
| host cell division inhibitory peptide kil | D4M06_RS27220 | Not Available | Positive | 5423046 - 5423189 | 5518.89 |
| host-nuclease inhibitor protein gam | D4M06_RS27225 | Not Available | Positive | 5423264 - 5423403 | 5611.52 |
| fumarate reductase (quinol) flavoprotein subunit | D4M06_RS27230 | Not Available | Positive | 5423404 - 5424863 | 53306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




