Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | D4M06_RS27135 | Not Available | Positive | 5415869 - 5416377 | 18893.0 |
| tail assembly protein | D4M06_RS27140 | Not Available | Positive | 5416411 - 5416885 | 16643.1 |
| chemotaxis protein | D4M06_RS27145 | Not Available | Positive | 5416886 - 5417187 | 11141.0 |
| patatin-like phospholipase family protein | D4M06_RS27150 | Not Available | Positive | 5417184 - 5417389 | 6687.09 |
| transposase | D4M06_RS27155 | Not Available | Positive | 5417390 - 5417892 | 18598.3 |
| rha family transcriptional regulator | D4M06_RS27160 | Not Available | Positive | 5418391 - 5418567 | 6618.99 |
| helix-turn-helix domain-containing protein | D4M06_RS27165 | Not Available | Positive | 5418590 - 5418885 | 10852.0 |
| duf3950 domain-containing protein | D4M06_RS27170 | Not Available | Negative | 5419121 - 5419348 | 8946.78 |
| duf1983 domain-containing protein | D4M06_RS27175 | Not Available | Positive | 5419361 - 5419832 | 17207.5 |
| hypothetical protein | D4M06_RS27180 | Not Available | Positive | 5419833 - 5420301 | 17289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




