Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | D4M06_RS00690 | Not Available | Positive | 158596 - 160248 | 62575.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | D4M06_RS00695 | Not Available | Positive | 160245 - 160580 | 12165.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | D4M06_RS00700 | Not Available | Positive | 160580 - 160966 | 14068.0 |
| signal transduction protein pmrd | D4M06_RS00705 | Not Available | Negative | 160960 - 161226 | 9887.09 |
| o-succinylbenzoate--coa ligase | D4M06_RS00710 | Not Available | Negative | 161336 - 162691 | 50291.6 |
| o-succinylbenzoate synthase | D4M06_RS00715 | Not Available | Negative | 162688 - 163650 | 35500.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | D4M06_RS00720 | Not Available | Negative | 163650 - 164507 | 31620.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | D4M06_RS00725 | Not Available | Negative | 164522 - 165280 | 27646.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | D4M06_RS00730 | Not Available | Negative | 165277 - 166947 | 61295.5 |
| isochorismate synthase menf | D4M06_RS00735 | Not Available | Negative | 167036 - 168331 | 48771.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




