Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS26865 | Not Available | Positive | 5394575 - 5394757 | 6544.46 |
| hypothetical protein | D4M06_RS26870 | Not Available | Positive | 5394770 - 5394901 | 4714.14 |
| lysis protein | D4M06_RS26875 | Not Available | Positive | 5394909 - 5395231 | 11862.5 |
| portal protein | D4M06_RS26880 | Not Available | Positive | 5395232 - 5395684 | 16343.1 |
| phage gp6-like head-tail connector protein | D4M06_RS26885 | Not Available | Positive | 5395687 - 5396013 | 12155.9 |
| phage gp6-like head-tail connector protein | D4M06_RS26895 | Not Available | Positive | 5396542 - 5396868 | 12072.7 |
| is256 family transposase | D4M06_RS26900 | Not Available | Positive | 5396943 - 5397761 | 31170.8 |
| helix-turn-helix domain-containing protein | D4M06_RS26905 | Not Available | Negative | 5397795 - 5398086 | 10786.0 |
| is3 family transposase | D4M06_RS26910 | Not Available | Positive | 5398190 - 5398645 | 17908.4 |
| duf1076 domain-containing protein | D4M06_RS26915 | Not Available | Negative | 5398659 - 5399231 | 20792.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




