Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail assembly protein | D4M06_RS26800 | Not Available | Negative | 5385998 - 5386380 | 13534.5 |
| phage tail protein | D4M06_RS26805 | Not Available | Negative | 5386326 - 5386996 | 25373.9 |
| antiterminator | D4M06_RS26810 | Not Available | Positive | 5387059 - 5387748 | 26471.9 |
| host specificity protein j | D4M06_RS26815 | Not Available | Negative | 5387955 - 5388877 | 33820.7 |
| hypothetical protein | D4M06_RS26820 | Not Available | Positive | 5388878 - 5389732 | 30892.8 |
| duf3950 domain-containing protein | D4M06_RS26825 | Not Available | Positive | 5389798 - 5389953 | 5973.27 |
| hypothetical protein | D4M06_RS26830 | Not Available | Negative | 5390083 - 5390223 | 5128.42 |
| duf945 domain-containing protein | D4M06_RS26840 | Not Available | Positive | 5391887 - 5392542 | 25207.0 |
| antitermination protein | D4M06_RS26850 | Not Available | Positive | 5393455 - 5393898 | 16826.1 |
| lysozyme | D4M06_RS26860 | Not Available | Positive | 5394345 - 5394419 | 2729.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




