Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| host specificity protein j | D4M06_RS26750 | Not Available | Positive | 5380674 - 5381765 | 39790.9 |
| hypothetical protein | D4M06_RS26755 | Not Available | Negative | 5381766 - 5382352 | 23176.7 |
| phage tail tape measure protein | D4M06_RS26760 | Not Available | Negative | 5382838 - 5383418 | 20216.0 |
| phage tail assembly protein t | D4M06_RS26765 | Not Available | Negative | 5383399 - 5383812 | 14890.4 |
| trmb family transcriptional regulator | D4M06_RS26770 | Not Available | Negative | 5383900 - 5384008 | 4001.72 |
| duf1133 family protein | D4M06_RS26775 | Not Available | Negative | 5384250 - 5384780 | 20397.0 |
| rusa family crossover junction endodeoxyribonuclease | D4M06_RS26780 | Not Available | Negative | 5384789 - 5384950 | 5907.07 |
| phage tail protein | D4M06_RS26785 | Not Available | Positive | 5384951 - 5385070 | 4493.25 |
| phage tail protein | D4M06_RS26790 | Not Available | Positive | 5385085 - 5385618 | 20270.3 |
| phage tail protein | D4M06_RS26795 | Not Available | Positive | 5385615 - 5385997 | 14453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




