Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dini family protein | D4M06_RS26700 | Not Available | Positive | 5376181 - 5376245 | 2692.44 |
| patatin-like phospholipase family protein | D4M06_RS26705 | Not Available | Positive | 5376248 - 5377318 | 38243.2 |
| trmb family transcriptional regulator | D4M06_RS26710 | Not Available | Negative | 5377379 - 5377443 | 2440.96 |
| duf1133 family protein | D4M06_RS26715 | Not Available | Negative | 5377668 - 5378222 | 21197.2 |
| rusa family crossover junction endodeoxyribonuclease | D4M06_RS26720 | Not Available | Negative | 5378285 - 5378482 | 7385.13 |
| rhs repeat protein | D4M06_RS26725 | Not Available | Positive | 5378484 - 5379580 | 41923.6 |
| duf1364 domain-containing protein | D4M06_RS26730 | Not Available | Positive | 5379581 - 5379843 | 9332.33 |
| crossover junction endodeoxyribonuclease rusa | D4M06_RS26735 | Not Available | Positive | 5379840 - 5380202 | 13846.7 |
| ylcg family protein | D4M06_RS26740 | Not Available | Positive | 5380199 - 5380339 | 5493.84 |
| antitermination protein | D4M06_RS26745 | Not Available | Positive | 5380425 - 5380673 | 9508.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




