Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS26645 | Not Available | Positive | 5368255 - 5368727 | 17586.3 |
| Trna-arg | Not Available | Not Available | Positive | 5368921 - 5368997 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5369098 - 5369173 | Not Available |
| helix-turn-helix domain-containing protein | D4M06_RS26660 | Not Available | Negative | 5369202 - 5369915 | 26534.7 |
| duf1737 domain-containing protein | D4M06_RS26665 | Not Available | Positive | 5370476 - 5371419 | 33537.6 |
| tail assembly protein | D4M06_RS26670 | Not Available | Negative | 5371420 - 5371994 | 20020.5 |
| phage tail protein | D4M06_RS26675 | Not Available | Negative | 5371931 - 5372674 | 28225.2 |
| secretion protein esps | D4M06_RS26680 | Not Available | Negative | 5372871 - 5373746 | 32180.3 |
| atp-binding protein | D4M06_RS26685 | Not Available | Positive | 5373932 - 5374611 | 25457.5 |
| site-specific integrase | D4M06_RS26695 | Not Available | Positive | 5375092 - 5376075 | 37026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




