Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holin | D4M06_RS26595 | Not Available | Positive | 5363268 - 5363483 | 8054.78 |
| lysozyme | D4M06_RS26600 | Not Available | Positive | 5363488 - 5364021 | 19625.6 |
| lysis protein | D4M06_RS26605 | Not Available | Positive | 5364320 - 5364518 | 7359.92 |
| duf1398 domain-containing protein | D4M06_RS26610 | Not Available | Negative | 5364679 - 5365089 | 16370.6 |
| hypothetical protein | D4M06_RS26615 | Not Available | Positive | 5365375 - 5365581 | 7624.14 |
| duf3950 domain-containing protein | D4M06_RS26620 | Not Available | Negative | 5365746 - 5365930 | 7059.32 |
| phage tail protein | D4M06_RS26625 | Not Available | Positive | 5365931 - 5366193 | 9622.74 |
| duf1076 domain-containing protein | D4M06_RS26630 | Not Available | Positive | 5366307 - 5366882 | 20250.2 |
| ygiw/ydei family stress tolerance ob fold protein | D4M06_RS26635 | Not Available | Positive | 5367515 - 5367859 | 12395.7 |
| hypothetical protein | D4M06_RS26640 | Not Available | Positive | 5367981 - 5368253 | 10888.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




