Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnonate dehydratase | D4M06_RS00640 | Not Available | Negative | 147897 - 149102 | 44252.1 |
| iclr family transcriptional regulator | D4M06_RS00645 | Not Available | Negative | 149117 - 149899 | 28934.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | D4M06_RS00650 | Not Available | Negative | 150119 - 151321 | 44194.2 |
| hypothetical protein | D4M06_RS00655 | Not Available | Negative | 151421 - 151963 | 18596.8 |
| nucleoside triphosphatase nudi | D4M06_RS00660 | Not Available | Positive | 152242 - 152667 | 16343.6 |
| histidine phosphatase family protein | D4M06_RS00665 | Not Available | Negative | 152706 - 153308 | 22277.7 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | D4M06_RS00670 | Not Available | Positive | 153616 - 154755 | 41653.1 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | D4M06_RS00675 | Not Available | Positive | 154759 - 155727 | 36339.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | D4M06_RS00680 | Not Available | Positive | 155727 - 157709 | 74214.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | D4M06_RS00685 | Not Available | Positive | 157706 - 158596 | 33139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




