Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D4M06_RS26485 | Not Available | Positive | 5350587 - 5351180 | 21431.7 |
| tail assembly chaperone | D4M06_RS26490 | Not Available | Negative | 5351152 - 5351595 | 16677.4 |
| phage tail protein | D4M06_RS26495 | Not Available | Negative | 5351616 - 5351973 | 12443.7 |
| hypothetical protein | D4M06_RS26500 | Not Available | Negative | 5352280 - 5352552 | 10342.7 |
| lysozyme | D4M06_RS26505 | Not Available | Positive | 5352712 - 5353245 | 19593.5 |
| hypothetical protein | D4M06_RS26510 | Not Available | Positive | 5353466 - 5353579 | 4139.18 |
| lysis protein | D4M06_RS26515 | Not Available | Positive | 5353581 - 5353779 | 7365.08 |
| type i toxin-antitoxin system hok family toxin | D4M06_RS26520 | Not Available | Positive | 5353804 - 5354016 | 7960.06 |
| hypothetical protein | D4M06_RS26525 | Not Available | Positive | 5354184 - 5354462 | 11225.1 |
| duf968 domain-containing protein | D4M06_RS26530 | Not Available | Positive | 5354464 - 5355513 | 39384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




