Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS26420 | Not Available | Positive | 5345335 - 5345520 | 7033.45 |
| hypothetical protein | D4M06_RS26425 | Not Available | Positive | 5345520 - 5345729 | 8191.81 |
| t3ss effector leucine-rich repeat protein espr4 | D4M06_RS26440 | Not Available | Positive | 5346454 - 5347318 | 32676.5 |
| gnat family n-acetyltransferase | D4M06_RS26445 | Not Available | Negative | 5347456 - 5347755 | 11293.6 |
| leucine-rich repeat domain-containing protein | D4M06_RS26450 | Not Available | Positive | 5348137 - 5348319 | 6738.86 |
| duf1737 domain-containing protein | D4M06_RS26455 | Not Available | Negative | 5348320 - 5348584 | 9512.3 |
| Trna-arg | Not Available | Not Available | Positive | 5349074 - 5349150 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5349248 - 5349323 | Not Available |
| helix-turn-helix domain-containing protein | D4M06_RS26475 | Not Available | Negative | 5349352 - 5350065 | 26832.1 |
| phage tail protein | D4M06_RS26480 | Not Available | Positive | 5350151 - 5350587 | 15592.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




