Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1391 domain-containing protein | D4M06_RS26370 | Not Available | Negative | 5337113 - 5337265 | 5590.59 |
| lexa family transcriptional regulator | D4M06_RS26375 | Not Available | Negative | 5337540 - 5338184 | 23173.1 |
| cell division protein | D4M06_RS26380 | Not Available | Positive | 5338282 - 5338509 | 8442.09 |
| rha family transcriptional regulator | D4M06_RS26385 | Not Available | Positive | 5338506 - 5338718 | 8290.8 |
| phage terminase large subunit family protein | D4M06_RS26390 | Not Available | Negative | 5338719 - 5340656 | 73366.2 |
| phage portal protein | D4M06_RS26395 | Not Available | Negative | 5340697 - 5342161 | 54477.5 |
| hypothetical protein | D4M06_RS26400 | Not Available | Negative | 5342107 - 5342328 | 8201.73 |
| hypothetical protein | D4M06_RS26405 | Not Available | Negative | 5342373 - 5342652 | 9773.43 |
| rhs repeat protein | D4M06_RS26410 | Not Available | Positive | 5342665 - 5344568 | 69656.2 |
| rhs repeat protein | D4M06_RS26415 | Not Available | Positive | 5344569 - 5345323 | 27318.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




