Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1737 domain-containing protein | D4M06_RS26320 | Not Available | Positive | 5330211 - 5330521 | 11397.5 |
| hypothetical protein | D4M06_RS26325 | Not Available | Positive | 5330579 - 5330716 | 5185.44 |
| alpha/beta hydrolase | D4M06_RS26330 | Not Available | Positive | 5331082 - 5331855 | 29216.8 |
| duf977 family protein | D4M06_RS26335 | Not Available | Negative | 5332207 - 5332609 | 15440.7 |
| exopolyphosphatase | D4M06_RS26340 | Not Available | Negative | 5332610 - 5333058 | 16083.7 |
| duf4035 domain-containing protein | D4M06_RS26345 | Not Available | Negative | 5333111 - 5333320 | 7574.0 |
| phage tail protein | D4M06_RS26350 | Not Available | Negative | 5333416 - 5333790 | 14078.8 |
| phage tail protein | D4M06_RS26355 | Not Available | Negative | 5333796 - 5334512 | 25558.9 |
| host specificity protein j | D4M06_RS26360 | Not Available | Positive | 5334686 - 5336329 | 59666.8 |
| ail/lom family outer membrane beta-barrel protein | D4M06_RS26365 | Not Available | Positive | 5336397 - 5336710 | 11602.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




