Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein ning | D4M06_RS26270 | Not Available | Positive | 5323891 - 5324006 | 4845.97 |
| host specificity protein j | D4M06_RS26275 | Not Available | Positive | 5324027 - 5326197 | 79574.5 |
| phage tail tape measure protein | D4M06_RS26280 | Not Available | Negative | 5326198 - 5326646 | 16206.9 |
| duf4035 domain-containing protein | D4M06_RS26285 | Not Available | Negative | 5326694 - 5326903 | 7584.96 |
| phage tail protein | D4M06_RS26290 | Not Available | Negative | 5326999 - 5327373 | 14036.8 |
| phage tail protein | D4M06_RS26295 | Not Available | Negative | 5327388 - 5328104 | 25393.8 |
| hypothetical protein | D4M06_RS26300 | Not Available | Negative | 5328170 - 5328385 | 7739.12 |
| site-specific dna-methyltransferase | D4M06_RS26305 | Not Available | Positive | 5328386 - 5329414 | 39417.0 |
| Trna-met | Not Available | Not Available | Positive | 5329455 - 5329530 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5329611 - 5329687 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




