Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D4M06_RS00590 | Not Available | Positive | 135159 - 136037 | 32670.1 |
| hypothetical protein | D4M06_RS00595 | Not Available | Positive | 136501 - 137571 | 41566.0 |
| glycerophosphodiester phosphodiesterase | D4M06_RS00600 | Not Available | Negative | 137795 - 138871 | 40858.6 |
| glycerol-3-phosphate transporter | D4M06_RS00605 | Not Available | Negative | 138876 - 140234 | 50346.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | D4M06_RS00610 | Not Available | Positive | 140507 - 142135 | 58961.7 |
| glycerol-3-phosphate dehydrogenase subunit glpb | D4M06_RS00615 | Not Available | Positive | 142125 - 143384 | 45403.0 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | D4M06_RS00620 | Not Available | Positive | 143381 - 144571 | 44110.4 |
| isncy family transposase | D4M06_RS00625 | Not Available | Positive | 144764 - 145690 | 35745.8 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | D4M06_RS00630 | Not Available | Negative | 145731 - 146525 | 28655.3 |
| mfs transporter | D4M06_RS00635 | Not Available | Negative | 146551 - 147840 | 46130.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




