Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 5296614 - 5296690 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5296704 - 5296780 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5296782 - 5296857 | Not Available |
| antiterminator | D4M06_RS26025 | Not Available | Negative | 5297171 - 5297659 | 18627.8 |
| transposase family protein | D4M06_RS26030 | Not Available | Negative | 5297759 - 5298018 | 9858.86 |
| sel1 repeat family protein | D4M06_RS26035 | Not Available | Negative | 5298764 - 5299303 | 20252.4 |
| rhs repeat protein | D4M06_RS26040 | Not Available | Negative | 5299372 - 5300268 | 33450.1 |
| rhs repeat protein | D4M06_RS26045 | Not Available | Negative | 5300269 - 5300447 | 6910.8 |
| ankyrin repeat domain-containing protein | D4M06_RS26050 | Not Available | Negative | 5300629 - 5301345 | 26925.5 |
| rhs repeat protein | D4M06_RS26055 | Not Available | Negative | 5301485 - 5302639 | 43520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




