Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna endoribonuclease lsoa | D4M06_RS25740 | Not Available | Positive | 5263140 - 5264180 | 39576.1 |
| type ii toxin-antitoxin system antitoxin lsob | D4M06_RS25745 | Not Available | Positive | 5264177 - 5264557 | 14527.4 |
| nika protein | D4M06_RS25750 | Not Available | Negative | 5264792 - 5265115 | 12073.8 |
| rop family plasmid primer rna-binding protein | D4M06_RS25755 | Not Available | Positive | 5265387 - 5265581 | 7270.57 |
| hypothetical protein | D4M06_RS25765 | Not Available | Positive | 5265769 - 5266140 | 13684.4 |
| replication protein | D4M06_RS25770 | Not Available | Positive | 5266423 - 5266502 | 2595.27 |
| protein ren | D4M06_RS25775 | Not Available | Positive | 5266499 - 5266801 | 11131.6 |
| smr family multidrug efflux protein emre | D4M06_RS25780 | Not Available | Positive | 5266869 - 5267201 | 11931.0 |
| hypothetical protein | D4M06_RS25785 | Not Available | Positive | 5267266 - 5267388 | 4771.17 |
| recombinase family protein | D4M06_RS25790 | Not Available | Positive | 5267446 - 5268972 | 57554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




