Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS25685 | Not Available | Positive | 5255123 - 5255314 | 6947.82 |
| hypothetical protein | D4M06_RS25690 | Not Available | Positive | 5255317 - 5255874 | 20727.3 |
| hypothetical protein | D4M06_RS25695 | Not Available | Positive | 5255984 - 5256088 | 3628.62 |
| hypothetical protein | D4M06_RS25700 | Not Available | Positive | 5256133 - 5256720 | 20541.7 |
| rhs repeat protein | D4M06_RS25705 | Not Available | Positive | 5256796 - 5259680 | 106562.0 |
| antitermination protein | D4M06_RS25710 | Not Available | Negative | 5259792 - 5260481 | 26180.2 |
| ylcg family protein | D4M06_RS25715 | Not Available | Negative | 5260496 - 5260618 | 4833.04 |
| lipid a deacylase lpxr family protein | D4M06_RS25720 | Not Available | Positive | 5260955 - 5261914 | 34935.9 |
| serine/threonine protein phosphatase | D4M06_RS25730 | Not Available | Negative | 5262126 - 5262791 | 25099.2 |
| recombination protein ning | D4M06_RS25735 | Not Available | Negative | 5262788 - 5263116 | 12501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




