Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase katp | D4M06_RS25575 | Not Available | Positive | 5242343 - 5244553 | 81798.5 |
| cytochrome b562 family protein | D4M06_RS25580 | Not Available | Positive | 5244597 - 5244986 | 14582.7 |
| phage tail protein | D4M06_RS25590 | Not Available | Positive | 5245408 - 5246709 | 46213.3 |
| tail fiber assembly protein | D4M06_RS25595 | Not Available | Positive | 5246712 - 5247245 | 20688.5 |
| tail fiber assembly protein | D4M06_RS25600 | Not Available | Negative | 5247274 - 5247801 | 20123.7 |
| phage tail protein | D4M06_RS25605 | Not Available | Negative | 5247803 - 5248645 | 30342.3 |
| hypothetical protein | D4M06_RS25610 | Not Available | Negative | 5248881 - 5249093 | 8400.17 |
| hypothetical protein | D4M06_RS25615 | Not Available | Negative | 5249090 - 5249191 | 3807.6 |
| hypothetical protein | D4M06_RS25620 | Not Available | Negative | 5249315 - 5249716 | 15310.8 |
| hepn domain-containing protein | D4M06_RS25625 | Not Available | Negative | 5249695 - 5250111 | 15749.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




