Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | D4M06_RS00545 | Not Available | Negative | 119215 - 120843 | 60417.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | D4M06_RS00550 | Not Available | Negative | 121051 - 123678 | 96983.3 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | D4M06_RS00555 | Not Available | Positive | 123825 - 124547 | 26587.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 123913 - 124028 | Not Available |
| aida-i family autotransporter adhesin yfal/ehac | D4M06_RS00560 | Not Available | Negative | 124688 - 128440 | 131365.0 |
| ribonucleoside-diphosphate reductase subunit alpha | D4M06_RS00565 | Not Available | Positive | 129136 - 131421 | 85722.9 |
| ribonucleoside-diphosphate reductase 1 subunit beta | D4M06_RS00570 | Not Available | Positive | 131648 - 132778 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | D4M06_RS00575 | Not Available | Positive | 132778 - 133032 | 9275.25 |
| lipopolysaccharide kinase inaa | D4M06_RS00580 | Not Available | Negative | 133086 - 133736 | 25285.5 |
| mfs transporter | D4M06_RS00585 | Not Available | Negative | 133817 - 135007 | 42908.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




