Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terminase large subunit | D4M06_RS25355 | Not Available | Positive | 5210030 - 5211691 | 60992.2 |
| phage major capsid protein | D4M06_RS25360 | Not Available | Positive | 5211755 - 5213369 | 57772.5 |
| alpha/beta hydrolase | D4M06_RS25365 | Not Available | Negative | 5213631 - 5215115 | 55046.2 |
| omptin family outer membrane protease ompt | D4M06_RS25370 | Not Available | Negative | 5215302 - 5216255 | 35595.1 |
| helix-turn-helix domain-containing protein | D4M06_RS25375 | Not Available | Positive | 5216754 - 5217338 | 21416.7 |
| elongation factor tu | D4M06_RS25390 | Not Available | Negative | 5217610 - 5217818 | 7432.77 |
| Trna-thr | Not Available | Not Available | Positive | 5217933 - 5218008 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5218015 - 5218089 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5218206 - 5218290 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5218299 - 5218374 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




