Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division inhibition protein dicb | D4M06_RS25170 | Not Available | Negative | 5186260 - 5186448 | 7073.64 |
| hypothetical protein | D4M06_RS25175 | Not Available | Positive | 5187022 - 5187207 | 6885.18 |
| hypothetical protein | D4M06_RS25180 | Not Available | Negative | 5187394 - 5187783 | 15160.1 |
| duf1391 domain-containing protein | D4M06_RS25185 | Not Available | Negative | 5187925 - 5188080 | 5792.67 |
| type ii toxin-antitoxin system rele/pare family toxin | D4M06_RS25190 | Not Available | Negative | 5188358 - 5188645 | 10979.5 |
| antitoxin | D4M06_RS25195 | Not Available | Negative | 5188645 - 5188836 | 7026.17 |
| helix-turn-helix domain-containing protein | D4M06_RS25200 | Not Available | Negative | 5188864 - 5189265 | 15302.5 |
| helix-turn-helix domain-containing protein | D4M06_RS25205 | Not Available | Positive | 5189374 - 5189646 | 10352.5 |
| rha family transcriptional regulator | D4M06_RS25210 | Not Available | Positive | 5189630 - 5190055 | 15985.4 |
| hypothetical protein | D4M06_RS25215 | Not Available | Negative | 5190262 - 5190717 | 17485.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




