Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb n-terminal domain-containing protein | D4M06_RS24905 | Not Available | Negative | 5143413 - 5144051 | 24150.8 |
| phosphoadenosine phosphosulfate reductase | D4M06_RS24910 | Not Available | Negative | 5144036 - 5145268 | 48698.3 |
| duf2726 domain-containing protein | D4M06_RS24915 | Not Available | Negative | 5145769 - 5147937 | 82395.8 |
| hypothetical protein | D4M06_RS24920 | Not Available | Negative | 5147934 - 5148449 | 19719.6 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D4M06_RS24925 | Not Available | Negative | 5148690 - 5149736 | 37226.2 |
| hypothetical protein | D4M06_RS24930 | Not Available | Negative | 5149881 - 5150180 | 11192.7 |
| helix-turn-helix domain-containing protein | D4M06_RS24935 | Not Available | Negative | 5150444 - 5150851 | 15506.7 |
| transcriptional regulator | D4M06_RS24940 | Not Available | Positive | 5150928 - 5151155 | 8315.95 |
| hypothetical protein | D4M06_RS24945 | Not Available | Positive | 5151139 - 5151690 | 21221.4 |
| dna-binding protein | D4M06_RS24950 | Not Available | Positive | 5151662 - 5152702 | 38484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




