Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1382 family protein | D4M06_RS24795 | Not Available | Negative | 5124742 - 5124933 | 7035.5 |
| duf1317 family protein | D4M06_RS24800 | Not Available | Negative | 5124906 - 5125061 | 5769.14 |
| is66 family insertion sequence hypothetical protein | D4M06_RS24805 | Not Available | Positive | 5125146 - 5125571 | 15987.0 |
| hypothetical protein | D4M06_RS24815 | Not Available | Negative | 5125871 - 5126053 | 6986.38 |
| gtpase family protein | D4M06_RS24820 | Not Available | Positive | 5126382 - 5127254 | 32499.8 |
| autotransporter adhesin ag43 | D4M06_RS24825 | Not Available | Positive | 5127626 - 5130475 | 97821.0 |
| dgtpase | D4M06_RS24830 | Not Available | Positive | 5130586 - 5132970 | 89608.4 |
| chemotaxis protein | D4M06_RS24835 | Not Available | Positive | 5132967 - 5133527 | 21098.9 |
| hypothetical protein | D4M06_RS24895 | Not Available | Negative | 5142400 - 5143044 | 25423.2 |
| perc family transcriptional regulator | D4M06_RS24900 | Not Available | Negative | 5143065 - 5143334 | 9939.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




