Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | D4M06_RS24745 | Not Available | Positive | 5115776 - 5116134 | 13700.4 |
| anion permease | D4M06_RS24750 | Not Available | Positive | 5116169 - 5117602 | 51339.8 |
| hydratase | D4M06_RS24755 | Not Available | Positive | 5117785 - 5120046 | 81364.0 |
| putative acyl-coa thioester hydrolase | D4M06_RS24760 | Not Available | Negative | 5120187 - 5121470 | 45983.5 |
| tyrosine-type recombinase/integrase | D4M06_RS24765 | Not Available | Negative | 5121605 - 5122486 | 32819.4 |
| excisionase | D4M06_RS24770 | Not Available | Negative | 5122649 - 5122867 | 8635.56 |
| hypothetical protein | D4M06_RS24775 | Not Available | Negative | 5122907 - 5123074 | 6564.64 |
| hypothetical protein | D4M06_RS24780 | Not Available | Positive | 5123317 - 5123919 | 23103.2 |
| trar/dksa family transcriptional regulator | D4M06_RS24785 | Not Available | Negative | 5124130 - 5124351 | 8204.77 |
| hypothetical protein | D4M06_RS24790 | Not Available | Negative | 5124450 - 5124731 | 10398.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




