Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | D4M06_RS24590 | Not Available | Negative | 5083936 - 5084994 | 39899.7 |
| dna gyrase inhibitor sbmc | D4M06_RS24595 | Not Available | Negative | 5085193 - 5085666 | 18062.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | D4M06_RS24600 | Not Available | Negative | 5085785 - 5086951 | 43318.5 |
| hypothetical protein | D4M06_RS24660 | Not Available | Negative | 5097857 - 5098126 | 10152.2 |
| replication protein p | D4M06_RS24665 | Not Available | Negative | 5098127 - 5101033 | 109180.0 |
| helix-turn-helix domain-containing protein | D4M06_RS24670 | Not Available | Negative | 5101144 - 5101875 | 27720.9 |
| hypothetical protein | D4M06_RS24675 | Not Available | Negative | 5102038 - 5102337 | 11251.5 |
| helix-turn-helix domain-containing protein | D4M06_RS24680 | Not Available | Negative | 5102476 - 5102703 | 8281.09 |
| helix-turn-helix transcriptional regulator | D4M06_RS24685 | Not Available | Positive | 5102782 - 5103489 | 26447.6 |
| duf3024 domain-containing protein | D4M06_RS24690 | Not Available | Positive | 5103550 - 5103891 | 13473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




