Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS24530 | Not Available | Positive | 5078654 - 5079064 | 15055.2 |
| duf945 domain-containing protein | D4M06_RS24535 | Not Available | Positive | 5079285 - 5080106 | 31308.5 |
| antirestriction protein | D4M06_RS24540 | Not Available | Positive | 5080188 - 5080667 | 18108.3 |
| radc family protein | D4M06_RS24545 | Not Available | Positive | 5080682 - 5081158 | 17689.4 |
| duf987 domain-containing protein | D4M06_RS24550 | Not Available | Positive | 5081221 - 5081442 | 8411.2 |
| type iv toxin-antitoxin system toxin cbta | D4M06_RS24555 | Not Available | Positive | 5081516 - 5081884 | 13610.2 |
| hypothetical protein | D4M06_RS24565 | Not Available | Positive | 5082343 - 5082537 | 6959.16 |
| duf957 domain-containing protein | D4M06_RS24570 | Not Available | Positive | 5082550 - 5082663 | 4213.22 |
| ethanolamine utilization protein | D4M06_RS24580 | Not Available | Positive | 5083152 - 5083334 | 6488.86 |
| duf496 family protein | D4M06_RS24585 | Not Available | Negative | 5083435 - 5083764 | 12778.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




