Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector arginine glycosyltransferase nleb | D4M06_RS24405 | Not Available | Positive | 5049791 - 5050780 | 37644.7 |
| type iii secretion system effector cysteine methyltransferase nlee | D4M06_RS24410 | Not Available | Positive | 5050829 - 5051503 | 26059.2 |
| cytotoxin | D4M06_RS24420 | Not Available | Positive | 5053378 - 5054679 | 50209.8 |
| hypothetical protein | D4M06_RS24425 | Not Available | Positive | 5054685 - 5055508 | 32223.7 |
| serine protease autotransporter espp | D4M06_RS24430 | Not Available | Positive | 5055646 - 5059548 | 141766.0 |
| polysaccharide deacetylase family protein | D4M06_RS24440 | Not Available | Positive | 5061726 - 5062547 | 32191.6 |
| glycosyltransferase family 4 protein | D4M06_RS24445 | Not Available | Positive | 5062547 - 5063653 | 40857.1 |
| phosphoethanolamine transferase cpta | D4M06_RS24450 | Not Available | Positive | 5063743 - 5065464 | 66240.1 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | D4M06_RS24455 | Not Available | Positive | 5065538 - 5066536 | 37860.3 |
| hypothetical protein | D4M06_RS24525 | Not Available | Positive | 5077955 - 5078638 | 25239.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




