Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na(+)/h(+) antiporter nhab | D4M06_RS24225 | Not Available | Negative | 5017245 - 5018786 | 56731.8 |
| fatty acid metabolism transcriptional regulator fadr | D4M06_RS24230 | Not Available | Positive | 5019008 - 5019727 | 26970.2 |
| spovr family protein | D4M06_RS24235 | Not Available | Negative | 5019779 - 5021311 | 60803.1 |
| d-amino acid dehydrogenase | D4M06_RS24240 | Not Available | Positive | 5021674 - 5022972 | 47610.1 |
| catabolic alanine racemase dadx | D4M06_RS24245 | Not Available | Positive | 5022982 - 5024052 | 38861.0 |
| is66 family insertion sequence hypothetical protein | D4M06_RS24360 | Not Available | Positive | 5040666 - 5041340 | 25602.9 |
| is66 family insertion sequence element accessory protein tnpb | D4M06_RS24365 | Not Available | Positive | 5041337 - 5041684 | 13043.2 |
| ail/lom family protein | D4M06_RS24380 | Not Available | Negative | 5044006 - 5044554 | 20384.5 |
| hypothetical protein | D4M06_RS24385 | Not Available | Negative | 5045127 - 5045300 | 5513.67 |
| shet2/espl2 family type iii secretion system effector toxin | D4M06_RS24395 | Not Available | Positive | 5047534 - 5049183 | 62159.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




