Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asch domain-containing protein | D4M06_RS24075 | Not Available | Positive | 4991191 - 4991601 | 15143.0 |
| autoinducer 2 abc transporter substrate-binding protein | D4M06_RS24080 | Not Available | Positive | 4991855 - 4992838 | 35524.1 |
| sugar abc transporter atp-binding protein | D4M06_RS24085 | Not Available | Positive | 4992887 - 4993147 | 9339.32 |
| sugar abc transporter atp-binding protein | D4M06_RS24090 | Not Available | Positive | 4993193 - 4994371 | 43323.7 |
| abc transporter permease | D4M06_RS24095 | Not Available | Positive | 4994364 - 4995335 | 34929.8 |
| abc transporter permease | D4M06_RS24100 | Not Available | Positive | 4995332 - 4996288 | 33795.9 |
| nadph-dependent aldehyde reductase yahk | D4M06_RS24105 | Not Available | Positive | 4996375 - 4997424 | 37970.6 |
| hypothetical protein | D4M06_RS24110 | Not Available | Positive | 4997667 - 4998482 | 31657.3 |
| Trna-pseudo | Not Available | Not Available | Positive | 4998828 - 4998908 | Not Available |
| lyse family transporter | D4M06_RS24120 | Not Available | Negative | 4999160 - 4999831 | 24839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




